STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP14995.1Predicted amidophosphoribosyltransferase. (239 aa)    
Predicted Functional Partners:
GAP13095.1
ComEC/Rec2-related protein.
 
  
 0.946
GAP14401.1
DNA protecting protein DprA.
 
 
 0.935
GAP14910.1
Histidine kinase.
  
  
 0.871
GAP12737.1
Predicted hydrolase.
  
  
 0.865
GAP15106.1
DNA replication and repair protein RadC; Belongs to the UPF0758 family.
 
    0.865
GAP14386.1
Anti-sigma regulatory factor.
  
    0.864
GAP13925.1
Prephenate dehydrogenase.
   
  
 0.848
GAP12627.1
Predicted Rossmann fold nucleotide-binding protein.
  
 
 0.827
GAP13747.1
N-acetylglucosamine 6-phosphate deacetylase.
  
    0.822
GAP14879.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
    0.811
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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