STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15069.1Uncharacterized protein conserved in bacteria. (345 aa)    
Predicted Functional Partners:
GAP14439.1
Glycine cleavage system T protein; Belongs to the GcvT family.
  
 
 0.953
GAP14461.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.900
GAP14910.1
Histidine kinase.
  
 
 0.879
GAP15606.1
Polyketide synthase module.
  
 0.839
GAP15467.1
birA, biotin-[acetyl-CoA-carboxylase] ligase region.
  
 
 0.811
GAP15066.1
Protein containg PAS domain S-box.
  
 
 0.809
GAP14911.1
Threonine synthase.
    
 0.723
GAP13585.1
Protein containg PAS domain S-box.
  
 
 0.717
GAP12393.1
Threonine dehydrogenase.
  
 
 0.687
GAP13148.1
Threonine dehydrogenase.
  
 
 0.687
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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