STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15161.1K+ transport systems, NAD-binding component. (220 aa)    
Predicted Functional Partners:
GAP15160.1
K+ transport systems, NAD-binding component.
 
    
0.854
GAP15162.1
Amino acid/polyamine/organocation transporter, APC superfamily.
 
   
 0.818
GAP15034.1
Molybdopterin synthase subunit MoaE.
   
    0.718
GAP15816.1
Sulfur transfer protein.
   
    0.718
GAP14003.1
Competence/damage-inducible protein CinA C-terminal domain; Belongs to the CinA family.
    
 0.696
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
   
    0.668
rpmH
LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family.
  
  
 0.588
GAP12819.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
  
 
 0.498
GAP15530.1
tRNA and rRNA cytosine-C5-methylases.
  
    0.452
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
  
 
  0.447
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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