STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15218.1Thiol reductant ABC exporter, CydD subunit. (599 aa)    
Predicted Functional Partners:
GAP15217.1
Hypothetical protein.
 
 0.999
GAP15216.1
ABC-type transport system.
 
 
0.986
GAP15211.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
  
 0.973
GAP15210.1
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
 
  
 0.970
GAP14335.1
ABC-type cobalt transport system, ATPase component.
    
0.910
GAP14108.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
     
0.899
GAP14779.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
     
0.771
pstB
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.584
GAP15709.1
ABC-type multidrug transport system, ATPase and permease component.
 
 
 
0.553
GAP13691.1
ABC-type multidrug transport system, ATPase and permease component.
 
 
 
0.552
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.