Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAP13445.1 | GAP14900.1 | LARV_01199 | LARV_02679 | acyl-CoA synthetase. | Hypothetical protein. | 0.621 |
GAP13445.1 | GAP15228.1 | LARV_01199 | LARV_03012 | acyl-CoA synthetase. | PAP2 superfamily. | 0.971 |
GAP13445.1 | GAP16096.1 | LARV_01199 | LARV_03892 | acyl-CoA synthetase. | acyl-CoA synthetase. | 0.948 |
GAP13445.1 | GAP16133.1 | LARV_01199 | LARV_03929 | acyl-CoA synthetase. | Superfamily II DNA/RNA helicase, SNF2 family. | 0.950 |
GAP13445.1 | dinG | LARV_01199 | LARV_01880 | acyl-CoA synthetase. | Exonuclease, DNA polymerase III, epsilon subunit family; 3'-5' exonuclease. | 0.859 |
GAP13445.1 | rplF | LARV_01199 | LARV_03092 | acyl-CoA synthetase. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.998 |
GAP14231.1 | GAP14900.1 | LARV_01997 | LARV_02679 | Glycerophosphoryl diester phosphodiesterase. | Hypothetical protein. | 0.853 |
GAP14231.1 | GAP15228.1 | LARV_01997 | LARV_03012 | Glycerophosphoryl diester phosphodiesterase. | PAP2 superfamily. | 0.859 |
GAP14749.1 | GAP14900.1 | LARV_02524 | LARV_02679 | Dolichol kinase. | Hypothetical protein. | 0.564 |
GAP14749.1 | GAP15228.1 | LARV_02524 | LARV_03012 | Dolichol kinase. | PAP2 superfamily. | 0.654 |
GAP14809.1 | GAP15228.1 | LARV_02585 | LARV_03012 | Sterol desaturase. | PAP2 superfamily. | 0.733 |
GAP14900.1 | GAP13445.1 | LARV_02679 | LARV_01199 | Hypothetical protein. | acyl-CoA synthetase. | 0.621 |
GAP14900.1 | GAP14231.1 | LARV_02679 | LARV_01997 | Hypothetical protein. | Glycerophosphoryl diester phosphodiesterase. | 0.853 |
GAP14900.1 | GAP14749.1 | LARV_02679 | LARV_02524 | Hypothetical protein. | Dolichol kinase. | 0.564 |
GAP14900.1 | GAP15228.1 | LARV_02679 | LARV_03012 | Hypothetical protein. | PAP2 superfamily. | 0.658 |
GAP14900.1 | GAP16096.1 | LARV_02679 | LARV_03892 | Hypothetical protein. | acyl-CoA synthetase. | 0.621 |
GAP14900.1 | dinG | LARV_02679 | LARV_01880 | Hypothetical protein. | Exonuclease, DNA polymerase III, epsilon subunit family; 3'-5' exonuclease. | 0.958 |
GAP14900.1 | rplF | LARV_02679 | LARV_03092 | Hypothetical protein. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.611 |
GAP15227.1 | GAP15228.1 | LARV_03011 | LARV_03012 | YtxH-like protein. | PAP2 superfamily. | 0.696 |
GAP15228.1 | GAP13445.1 | LARV_03012 | LARV_01199 | PAP2 superfamily. | acyl-CoA synthetase. | 0.971 |
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