STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15330.1Haloacid dehalogenase superfamily, subfamily IA, variant 3. (209 aa)    
Predicted Functional Partners:
pyrF
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP); Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily.
  
 
  0.812
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.811
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.786
GAP14003.1
Competence/damage-inducible protein CinA C-terminal domain; Belongs to the CinA family.
    
  0.778
GAP15329.1
Phosphoesterase, MJ0936 family.
       0.773
GAP13855.1
Transcriptional regulator/sugar kinase.
   
 
  0.766
GAP14239.1
Transcriptional regulator/sugar kinase.
   
 
  0.766
GAP15013.1
Transcriptional regulator/sugar kinase.
   
 
  0.766
GAP12370.1
Trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain.
   
 
  0.746
GAP12676.1
Protein containg AAA ATPase domain.
   
 
  0.746
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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