STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15347.1Uncharacterized protein containing a von Willebrand factor type A (vWA) domain. (415 aa)    
Predicted Functional Partners:
GAP15348.1
Predicted transcriptional regulator.
  
    0.781
GAP15346.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
       0.520
GAP15349.1
Kynurenine formamidase.
       0.485
GAP13617.1
Protein containg RHS repeat-associated core domain.
  
  
  0.454
GAP13801.1
Glucose/sorbosone dehydrogenases.
  
     0.434
GAP15350.1
N-acetyl-beta-hexosaminidase.
       0.421
GAP13182.1
Periplasmic component of the Tol biopolymer transport system.
  
     0.419
GAP13986.1
ADP-ribosylglycohydrolase.
 
     0.408
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.