STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15437.1Predicted amino acid aldolase or racemase. (368 aa)    
Predicted Functional Partners:
GAP12400.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
   
    0.730
GAP14848.1
Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.560
GAP15436.1
DNA polymerase IV.
       0.554
GAP12718.1
L-threonine ammonia-lyase.
    
 0.521
GAP14232.1
Threonine dehydratase.
    
 0.521
GAP12516.1
Predicted enzyme related to lactoylglutathione lyase.
   
 
  0.520
GAP12523.1
Predicted enzyme related to lactoylglutathione lyase.
   
 
  0.520
GAP12641.1
Lactoylglutathione lyase.
   
 
  0.520
GAP13876.1
NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
     
 0.510
GAP15742.1
Acetaldehyde dehydrogenase.
     
 0.510
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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