STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15520.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (458 aa)    
Predicted Functional Partners:
GAP15521.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.985
GAP15522.1
Maltose ABC transporter membrane protein.
 
  0.976
GAP15093.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.943
GAP12582.1
Phosphate ABC transporter ATP-binding protein, PhoT family; Belongs to the ABC transporter superfamily.
  
 0.883
GAP12492.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.822
GAP12857.1
ABC-type sugar transport system, permease component.
  
  0.822
GAP13571.1
ABC-type sugar transport system, permease component.
  
  0.822
GAP15516.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.775
GAP15517.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.740
GAP13861.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.713
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.