STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15573.1Probable F420-dependent oxidoreductase, Rv2161c family. (290 aa)    
Predicted Functional Partners:
GAP14439.1
Glycine cleavage system T protein; Belongs to the GcvT family.
  
  
 0.840
GAP14709.1
Coenzyme F420-0 gamma-glutamyl ligase.
 
   
 0.798
GAP15577.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.797
GAP14054.1
Fe-S-cluster-containing hydrogenase components 1.
   
 
 0.796
GAP14707.1
LPPG:FO 2-phospho-L-lactate transferase.
 
   
 0.785
fbiD
Phospholactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
 
   
 0.776
GAP15572.1
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
  
    0.773
GAP15574.1
Hypothetical protein.
       0.773
GAP14859.1
Thioredoxin reductase.
    
 0.743
GAP13968.1
Methylenetetrahydromethanopterin reductase.
  
     0.742
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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