STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15602.1Predicted hydrolase. (278 aa)    
Predicted Functional Partners:
GAP12819.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
  
 
  0.820
GAP13444.1
Acyl carrier protein.
    
  0.761
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
  0.761
GAP16095.1
Acyl carrier protein.
    
  0.761
GAP15606.1
Polyketide synthase module.
  
 0.717
GAP14439.1
Glycine cleavage system T protein; Belongs to the GcvT family.
   
 0.682
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
  0.677
GAP15239.1
Predicted dehydrogenase.
  
 0.621
GAP14003.1
Competence/damage-inducible protein CinA C-terminal domain; Belongs to the CinA family.
    
  0.607
GAP15600.1
ABC-type cobalt transport system, permease component CbiQ.
       0.584
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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