Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
GAP15682.1Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (252 aa)    
Predicted Functional Partners:
GAP13585.1
Protein containg PAS domain S-box.
 0.994
GAP15066.1
Protein containg PAS domain S-box.
 0.990
GAP14816.1
Signal transduction histidine kinase.
 0.988
GAP12367.1
Signal transduction histidine kinase.
 
 0.979
GAP15113.1
Histidine kinase.
 0.978
GAP15112.1
Histidine kinase.
 
  0.975
GAP15681.1
Signal transduction histidine kinase.
   0.970
GAP14910.1
Histidine kinase.
  
 0.969
GAP15497.1
Protein containg PAS domain S-box.
  
 0.960
GAP12564.1
Protein containg PAS domain S-box.
 0.957
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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