STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15688.1Uncharacterized membrane-associated protein. (192 aa)    
Predicted Functional Partners:
GAP12889.1
Membrane proteins related to metalloendopeptidases.
 
     0.734
GAP13118.1
Phospholipase C.
  
  
 0.608
GAP15667.1
ABC-type transport system.
 
    0.560
GAP14000.1
Glycosyltransferase.
  
     0.551
GAP14062.1
Hypothetical protein.
  
     0.551
GAP13197.1
Predicted ATPase.
  
     0.550
GAP16120.1
Ketosteroid isomerase-related protein.
  
     0.544
GAP14731.1
Predicted transcriptional regulator containing an HTH domain.
 
     0.543
GAP12511.1
Hypothetical protein.
  
     0.512
GAP14001.1
Glycosyltransferase.
  
     0.510
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.