STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15691.1Flavodoxin. (172 aa)    
Predicted Functional Partners:
GAP14464.1
Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
    
 0.800
GAP15692.1
Hypothetical protein.
       0.615
GAP12537.1
Prenyltransferase-like.
  
     0.576
GAP13306.1
Hypothetical protein.
 
     0.562
GAP15693.1
Hypothetical protein.
       0.536
GAP14672.1
Coproporphyrinogen III oxidase.
    
 0.526
GAP15690.1
Hypothetical protein.
       0.480
GAP12642.1
Protoporphyrinogen oxidase.
     
 0.460
GAP15629.1
Protoporphyrinogen oxidase.
     
 0.460
GAP15833.1
Protoporphyrinogen oxidase.
     
 0.460
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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