STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15706.1Predicted membrane protein. (262 aa)    
Predicted Functional Partners:
GAP15704.1
Hypothetical protein.
       0.742
GAP15705.1
EDD domain protein, DegV family.
       0.742
GAP15703.1
Peroxiredoxin.
       0.737
GAP15696.1
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
     0.690
GAP15702.1
Peroxiredoxin.
       0.685
GAP14363.1
Predicted hydrolase.
 
      0.682
GAP15950.1
Cyclopropane-fatty-acyl-phospholipid synthase.
     0.604
GAP15701.1
Predicted cobalamin binding protein.
       0.501
GAP15700.1
Peroxiredoxin.
 
     0.464
GAP15707.1
Transcriptional regulator.
       0.454
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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