STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15779.1ABC-type polysaccharide/polyol phosphate export system, permease component. (255 aa)    
Predicted Functional Partners:
GAP15778.1
ABC-type multidrug transport system, ATPase component.
 
  0.970
GAP15777.1
Uncharacterized low-complexity proteins.
 
     0.855
GAP15776.1
Predicted transcriptional regulator.
 
     0.754
GAP13461.1
ABC-type polysaccharide/polyol phosphate export system, permease component.
    
  0.592
GAP13770.1
ABC-type polysaccharide/polyol phosphate export system, permease component.
    
  0.592
GAP13951.1
ABC-type polysaccharide/polyol phosphate export system, permease component.
    
  0.592
GAP12999.1
ABC-type multidrug transport system, permease component.
  
 
  0.573
GAP15078.1
ABC-type multidrug transport system, ATPase component.
 
 
  0.544
GAP12418.1
Protein containg Winged helix DNA-binding domain.
  
     0.516
GAP12998.1
Daunorubicin resistance ABC transporter ATP-binding subunit.
 
 
  0.512
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.