Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAP15815.1Acetyl esterase. (323 aa)    
Predicted Functional Partners:
GAP13569.1
ABC-type sugar transport system, periplasmic component.
 
     0.622
GAP14860.1
glycine/D-amino acid oxidase.
     
  0.612
GAP12604.1
ABC-type multidrug transport system, ATPase and permease component.
  
     0.552
GAP13019.1
Putative glycosyl hydrolase.
  
     0.522
xylA
Xylose isomerase, Arthrobacter type; Belongs to the xylose isomerase family.
 
     0.520
GAP13741.1
ABC-type dipeptide transport system, periplasmic component.
  
     0.519
GAP12613.1
Hypothetical protein.
  
     0.421
GAP13438.1
Predicted kinase related to galactokinase and mevalonate kinase.
     
  0.417
GAP15816.1
Sulfur transfer protein.
       0.415
GAP15817.1
Aldehyde:ferredoxin oxidoreductase.
       0.415
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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