STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15855.1Uncharacterized protein of the AP superfamily. (553 aa)    
Predicted Functional Partners:
GAP12489.1
Alpha-glucosidase, family 31 of glycosyl hydrolases; Belongs to the glycosyl hydrolase 31 family.
  
 
  0.715
GAP12855.1
Alpha-glucosidase, family 31 of glycosyl hydrolases; Belongs to the glycosyl hydrolase 31 family.
    
  0.677
GAP12498.1
Predicted integral membrane protein.
  
 0.648
GAP15854.1
Hypothetical protein.
 
     0.641
GAP12821.1
Predicted integral membrane protein.
   
 0.603
GAP15793.1
Hypothetical protein.
   
 0.603
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
  
 0.568
GAP13887.1
Maltodextrin phosphorylase.
     
 0.545
GAP13511.1
Glycerophosphoryl diester phosphodiesterase.
  
 
 0.541
GAP14231.1
Glycerophosphoryl diester phosphodiesterase.
  
 
 0.541
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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