STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15912.1Sugar (pentulose and hexulose) kinase. (515 aa)    
Predicted Functional Partners:
GAP14600.1
Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.864
xylA
Xylose isomerase, Arthrobacter type; Belongs to the xylose isomerase family.
  
 
 0.838
GAP15911.1
Glycerol-3-phosphate dehydrogenase.
  
 0.828
GAP13565.1
L-ribulose 5-phosphate 4-epimerase.
  
 
 0.817
GAP13379.1
Glycerol-3-phosphate dehydrogenase.
  
 0.720
GAP13380.1
FAD/FMN-containing dehydrogenases.
 
   
 0.684
GAP12741.1
Ribulose-5-phosphate 4-epimerase.
 
 
 0.632
GAP15766.1
L-fuculose 1-phosphate aldolase.
  
 
 0.632
GAP15760.1
Sugar (pentulose and hexulose) kinase; Belongs to the FGGY kinase family.
  
  
 
0.631
GAP13983.1
Sugar (pentulose and hexulose) kinase; Belongs to the FGGY kinase family.
  
  
 
0.627
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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