STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15918.1Predicted acetyltransferase. (299 aa)    
Predicted Functional Partners:
GAP12571.1
Sortase.
 
  
  0.684
GAP14480.1
N-acetylglutamate synthase.
 
 
 0.652
GAP14303.1
ABC-type uncharacterized transport system, permease component.
  
     0.623
GAP14304.1
ABC-type uncharacterized transport system, permease component.
  
     0.617
GAP14305.1
ABC-type uncharacterized transport system, ATPase component.
  
     0.568
GAP15332.1
Acetyltransferase (GNAT) family.
  
    0.560
pxpA
Uncharacterized protein, homolog of lactam utilization protein B; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
    
  0.494
GAP15919.1
Hypothetical protein.
       0.479
GAP15119.1
Predicted acetyltransferase.
  
 
 0.466
lysZ
N-acetylglutamate kinase; Catalyzes the phosphorylation of LysW-gamma-alpha- aminoadipate; Belongs to the acetylglutamate kinase family. LysZ subfamily.
    
  0.448
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.