STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP15966.1Ketopantoate reductase. (361 aa)    
Predicted Functional Partners:
GAP14450.1
Ketopantoate reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
  
  
  0.927
GAP15965.1
Coenzyme F420-reducing hydrogenase, gamma subunit.
       0.517
GAP14978.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase.
    
 0.509
GAP15403.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase.
    
 0.509
GAP15963.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
  0.469
GAP12387.1
Cystathionine beta-lyases/cystathionine gamma-synthases.
   
 
  0.453
GAP12405.1
Aspartate/tyrosine/aromatic aminotransferase.
  
 
  0.434
GAP13091.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
  
  0.425
GAP15361.1
Dolichyl-phosphate-mannose-protein mannosyltransferase/NHL repeat.
    
  0.418
GAP16105.1
Protein containg RHS repeat-associated core domain.
    
  0.418
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.