STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FPOA_09933Uncharacterized protein. (609 aa)    
Predicted Functional Partners:
FPOA_03174
Uncharacterized protein.
    
 0.813
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.802
FPOA_04081
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.781
FPOA_11485
Tr-type G domain-containing protein.
   
 0.778
FPOA_10220
CPSF_A domain-containing protein.
   
 0.763
FPOA_10021
SF3b1 domain-containing protein.
   
 0.757
FPOA_06860
RRM domain-containing protein.
    
 0.747
FPOA_11123
PAT1 domain-containing protein.
   
 0.746
LSM3
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.746
FPOA_02777
Uncharacterized protein.
    
 0.740
Your Current Organism:
Fusarium poae
NCBI taxonomy Id: 36050
Other names: F. poae
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