STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FPOA_05731C2H2-type domain-containing protein. (326 aa)    
Predicted Functional Partners:
FPOA_11043
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.937
FPOA_10170
CP-type G domain-containing protein.
   
 
 0.926
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
   
 
 0.906
FPOA_09922
Peptidase_M24 domain-containing protein.
   
 
 0.905
FPOA_04346
Uncharacterized protein.
    
 
 0.847
FPOA_02534
Uncharacterized protein.
   
 
 0.836
FPOA_02483
Ribosomal_L23eN domain-containing protein.
   
 
 0.831
FPOA_08425
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.830
FPOA_02903
Uncharacterized protein.
    
   0.829
FPOA_01891
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
    
 
 0.826
Your Current Organism:
Fusarium poae
NCBI taxonomy Id: 36050
Other names: F. poae
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