STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN51563.1Glycogen synthase. (400 aa)    
Predicted Functional Partners:
malS
Alpha-amylase precursor.
  
 0.887
glgB
1%2C4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.868
mshA_1
D-inositol-3-phosphate glycosyltransferase.
 
     0.841
CUN51537.1
Uncharacterised protein.
 
     0.819
ptk
Tyrosine-protein kinase ptk.
  
  
 0.816
CUN51508.1
Uncharacterised protein.
       0.771
kfoC_1
Chondroitin polymerase.
  
 
 0.770
wcaJ_1
Putative colanic biosynthesis UDP-glucose lipid carrier transferase.
 
    0.765
CUN51482.1
Uncharacterised protein.
       0.762
tagA_1
Putative N-acetylmannosaminyltransferase.
 
 
 0.758
Your Current Organism:
Roseburia inulinivorans
NCBI taxonomy Id: 360807
Other names: DSM 16841, NCIMB 14030, R. inulinivorans, Roseburia inulinivorans Duncan et al. 2006, butyrate-producing bacterium A2-194, butyrate-producing bacterium L1-83, strain A2-194
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.