STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN67049.1Uncharacterised protein. (511 aa)    
Predicted Functional Partners:
CUN67111.1
Mycofactocin system glycosyltransferase.
       0.781
yvhJ_1
Putative transcriptional regulator yvhJ.
       0.781
ykoT_2
Uncharacterized glycosyltransferase ykoT.
       0.779
wcaJ_4
Putative colanic biosynthesis UDP-glucose lipid carrier transferase.
       0.760
wbbL_2
dTDP-Rha:alpha-D-GlcNAc-pyrophosphate polyprenol%2C alpha-3-L-rhamnosyltransferase.
       0.459
CUN67237.1
Uncharacterised protein.
       0.459
CUN67268.1
Uncharacterised protein.
       0.459
hhoB
Putative serine protease HhoB precursor.
       0.445
Your Current Organism:
Roseburia inulinivorans
NCBI taxonomy Id: 360807
Other names: DSM 16841, NCIMB 14030, R. inulinivorans, Roseburia inulinivorans Duncan et al. 2006, butyrate-producing bacterium A2-194, butyrate-producing bacterium L1-83, strain A2-194
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.