STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
murRMurPQ operon repressor. (276 aa)    
Predicted Functional Partners:
porA
Pyruvate synthase subunit porA.
  
 
  0.933
nagB_2
Glucosamine-6-phosphate deaminase 1; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
    
 0.803
nanE
Putative N-acetylmannosamine-6-phosphate 2-epimerase.
 
   
 0.637
fruA
EIIABC-Fru.
     
 0.622
gmuF
Probable mannose-6-phosphate isomerase gmuF.
  
 
 0.531
nanA
N-acetylneuraminate lyase.
 
   
 0.522
eda
Putative KHG/KDPG aldolase.
    
 0.450
CUN77376.1
Predicted ATPase (AAA+ superfamily).
       0.435
CUN77251.1
Maltose-binding periplasmic proteins/domains.
 
     0.402
Your Current Organism:
Roseburia inulinivorans
NCBI taxonomy Id: 360807
Other names: DSM 16841, NCIMB 14030, R. inulinivorans, Roseburia inulinivorans Duncan et al. 2006, butyrate-producing bacterium A2-194, butyrate-producing bacterium L1-83, strain A2-194
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.