STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoIIIACStage III sporulation protein AC. (64 aa)    
Predicted Functional Partners:
CUO01513.1
Stage III sporulation protein AD.
 
  
 0.990
spoIIIAE
Stage III sporulation protein AE precursor.
 
  
 0.985
CUO01423.1
Uncharacterized protein conserved in bacteria.
 
  
 0.981
CUO01455.1
Stage III sporulation protein SpoAB.
  
  
 0.966
CUO01614.1
Stage III sporulation protein AG.
 
  
 0.953
CUO01581.1
Stage III sporulation protein AF.
  
  
 0.948
spoIIIAH
Stage III sporulation protein AH.
 
  
 0.939
CUN59103.1
Stage II sporulation protein P.
  
  
 0.842
spoIIID
14 kDa transcription factor.
  
  
 0.824
CUN91283.1
Stage V sporulation protein AC.
  
     0.757
Your Current Organism:
Roseburia inulinivorans
NCBI taxonomy Id: 360807
Other names: DSM 16841, NCIMB 14030, R. inulinivorans, Roseburia inulinivorans Duncan et al. 2006, butyrate-producing bacterium A2-194, butyrate-producing bacterium L1-83, strain A2-194
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.