STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO07626.1Predicted ATP-binding protein involved in virulence. (726 aa)    
Predicted Functional Partners:
uvrD
DNA helicase II.
 
   
 0.854
CUO17278.1
Domain of uncharacterised function (DUF3387).
 
    0.815
CUO07551.1
Uncharacterised protein.
       0.784
CUN46654.1
Uncharacterized protein conserved in archaea.
  
    0.584
CUN58159.1
Uncharacterised protein.
  
    0.584
CUN66391.1
Divergent AAA domain.
  
    0.584
CUN70171.1
Divergent AAA domain.
  
    0.584
CUO17262.1
Uncharacterised protein.
  
    0.584
CUN84555.1
Predicted hydrolase (HAD superfamily).
   
    0.531
CUO07927.1
Predicted hydrolase (HAD superfamily).
   
    0.531
Your Current Organism:
Roseburia inulinivorans
NCBI taxonomy Id: 360807
Other names: DSM 16841, NCIMB 14030, R. inulinivorans, Roseburia inulinivorans Duncan et al. 2006, butyrate-producing bacterium A2-194, butyrate-producing bacterium L1-83, strain A2-194
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.