STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO49373.1Uncharacterised protein. (167 aa)    
Predicted Functional Partners:
CUO49447.1
Efflux transporter%2C RND family%2C MFP subunit.
       0.706
macB_10
Macrolide export ATP-binding/permease protein MacB.
       0.694
macB_11
Macrolide export ATP-binding/permease protein MacB.
       0.692
dacD
D-alanyl-D-alanine carboxypeptidase dacD precursor.
       0.634
arlR_4
Response regulator ArlR.
       0.487
phoR_11
Alkaline phosphatase synthesis sensor protein phoR.
       0.441
phoP_4
Alkaline phosphatase synthesis transcriptional regulatory protein phoP.
       0.441
CUO49584.1
Predicted transcriptional regulator.
       0.441
Your Current Organism:
Roseburia inulinivorans
NCBI taxonomy Id: 360807
Other names: DSM 16841, NCIMB 14030, R. inulinivorans, Roseburia inulinivorans Duncan et al. 2006, butyrate-producing bacterium A2-194, butyrate-producing bacterium L1-83, strain A2-194
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.