STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO50634.1Uncharacterised protein. (316 aa)    
Predicted Functional Partners:
CUN65154.1
PUA domain (predicted RNA-binding domain).
  
 0.999
CUO50608.1
Sucrose phosphorylase.
     0.987
fbpC_1
Fe(3+) ions import ATP-binding protein FbpC.
  
 
 0.955
gltD_1
Glutamate synthase [NADPH] small chain.
 
  
 0.900
CUO52481.1
Transferase 2%2C rSAM/selenodomain-associated.
  
 0.721
CUN93895.1
Plasmid recombination enzyme.
  
  
 0.717
cysK1
O-acetylserine sulfhydrylase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.717
yieL_2
Predicted hydrolase of the alpha/beta superfamily.
 
     0.649
kfoC_1
Chondroitin polymerase.
 
  
 0.630
kfoC_4
Chondroitin polymerase.
 
  
 0.628
Your Current Organism:
Roseburia inulinivorans
NCBI taxonomy Id: 360807
Other names: DSM 16841, NCIMB 14030, R. inulinivorans, Roseburia inulinivorans Duncan et al. 2006, butyrate-producing bacterium A2-194, butyrate-producing bacterium L1-83, strain A2-194
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