STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A077YVM4Pre mRNA splicing factor SLU7. (478 aa)    
Predicted Functional Partners:
A0A077Z5B5
Pre mRNA splicing factor ATP dependent RNA.
   
 0.999
A0A077Z950
Pre mrna splicing factor pre mrna processing fac tor.
   
 0.999
A0A077YW31
Pre mRNA splicing factor 18.
  
 0.997
A0A077Z0R8
Pre mrna splicing factor syf2.
   
 0.996
A0A077Z216
MA3 and MIF4G domain containing protein.
   
 0.996
A0A077Z2S0
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.994
A0A077ZEA2
Cell division cycle 5 protein like.
   
 
 0.993
A0A077Z466
Pre mRNA processing splicing factor 8.
    
 
 0.992
A0A077Z5M4
U5 small nuclear ribonucleoprotein 200 kDa.
    
 
 0.992
A0A077ZBN6
G10 protein.
    
 
 0.992
Your Current Organism:
Trichuris trichiura
NCBI taxonomy Id: 36087
Other names: T. trichiura, human whipworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.