STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A077YXG8Zf-MYND domain containing protein. (495 aa)    
Predicted Functional Partners:
A0A077ZIJ8
SET domain containing protein.
    
 0.816
A0A077Z1W7
PHD finger protein.
    
 0.804
A0A077Z7E7
Set1:Ash2 histone methyltransferase complex.
    
 0.800
A0A077ZG89
Retinoblastoma binding protein 5.
    
 0.800
A0A077ZBK8
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
   
 0.798
A0A077ZH12
Lysine specific demethylase 6a.
  
 0.780
A0A077ZLG6
F bP aldolase and UPF0047 and TIM domain containi ng protein.
    
 0.770
A0A077ZPT8
Fructose-bisphosphate aldolase.
    
 0.770
A0A077Z0U4
Ubiquitin ribosomal protein putative ubiquitin f amily protein.
    
  0.741
A0A077Z9H5
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.737
Your Current Organism:
Trichuris trichiura
NCBI taxonomy Id: 36087
Other names: T. trichiura, human whipworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.