STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A077YXS3Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. (568 aa)    
Predicted Functional Partners:
A0A077Z9E6
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
   
 0.982
A0A077ZG75
Tetraspanin.
   
 0.971
A0A077Z4J7
WD40 domain containing protein.
   
 
 0.970
A0A077Z2T7
Uncharacterized protein.
   
 0.964
A0A077YZS3
KTI12 domain containing protein.
   
 
 0.900
A0A077Z103
ATP bind 3 domain containing protein.
   
 
 0.763
A0A077Z317
Utp12 and WD40 domain containing protein.
   
   0.757
A0A077ZD29
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
  
 0.737
A0A077ZFQ3
U3 small nucleolar RNA associated protein 18.
   
   0.730
A0A077Z576
RNA 3' terminal phosphate cyclase protein.
   
  
 0.717
Your Current Organism:
Trichuris trichiura
NCBI taxonomy Id: 36087
Other names: T. trichiura, human whipworm
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