A0A077YZW4 protein (Trichuris trichiura) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A077YZW4

Parathyroid hormone 2 receptor. (142 aa)

Predicted Functional Partners:

A0A077Z7M7

0.883

A0A077Z0D0

0.847

A0A077Z7M3

0.847

A0A077YUW2

0.835

A0A077YXJ8

0.812

A0A077ZFK1

0.812

A0A077YVU8

0.744

A0A077Z220

0.708

A0A077ZIN0

0.708

A0A077ZBQ2

0.699

Your Current Organism:

Trichuris trichiura

NCBI taxonomy Id: 36087
Other names: T. trichiura, human whipworm

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A077YUW2	A0A077YVU8	Guanine nucleotide binding protein Gq alpha.	Guanine nucleotide binding protein subunit.	0.725
A0A077YUW2	A0A077YXJ8	Guanine nucleotide binding protein Gq alpha.	Guanine nucleotide binding protein subunit.	0.990
A0A077YUW2	A0A077YZW4	Guanine nucleotide binding protein Gq alpha.	Parathyroid hormone 2 receptor.	0.835
A0A077YUW2	A0A077Z0D0	Guanine nucleotide binding protein Gq alpha.	Muscle M line assembly protein unc 89.	0.990
A0A077YUW2	A0A077Z220	Guanine nucleotide binding protein Gq alpha.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.979
A0A077YUW2	A0A077Z7M3	Guanine nucleotide binding protein Gq alpha.	Muscle M line assembly protein unc 89.	0.990
A0A077YUW2	A0A077ZBQ2	Guanine nucleotide binding protein Gq alpha.	Dipeptidyl peptidase family; Belongs to the peptidase S9B family.	0.579
A0A077YUW2	A0A077ZFK1	Guanine nucleotide binding protein Gq alpha.	Guanine nucleotide binding protein subunit.	0.989
A0A077YUW2	A0A077ZIN0	Guanine nucleotide binding protein Gq alpha.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.980
A0A077YVU8	A0A077YUW2	Guanine nucleotide binding protein subunit.	Guanine nucleotide binding protein Gq alpha.	0.725
A0A077YVU8	A0A077YXJ8	Guanine nucleotide binding protein subunit.	Guanine nucleotide binding protein subunit.	0.976
A0A077YVU8	A0A077YZW4	Guanine nucleotide binding protein subunit.	Parathyroid hormone 2 receptor.	0.744
A0A077YVU8	A0A077Z0D0	Guanine nucleotide binding protein subunit.	Muscle M line assembly protein unc 89.	0.661
A0A077YVU8	A0A077Z220	Guanine nucleotide binding protein subunit.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.840
A0A077YVU8	A0A077Z7M3	Guanine nucleotide binding protein subunit.	Muscle M line assembly protein unc 89.	0.661
A0A077YVU8	A0A077Z7M7	Guanine nucleotide binding protein subunit.	GTP binding regulatory protein Gs alpha S chain.	0.756
A0A077YVU8	A0A077ZBQ2	Guanine nucleotide binding protein subunit.	Dipeptidyl peptidase family; Belongs to the peptidase S9B family.	0.655
A0A077YVU8	A0A077ZFK1	Guanine nucleotide binding protein subunit.	Guanine nucleotide binding protein subunit.	0.976
A0A077YVU8	A0A077ZIN0	Guanine nucleotide binding protein subunit.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.927
A0A077YXJ8	A0A077YUW2	Guanine nucleotide binding protein subunit.	Guanine nucleotide binding protein Gq alpha.	0.990