STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A077Z3Y2Transmembrane and TPR repeat-containing protein 4. (588 aa)    
Predicted Functional Partners:
A0A077Z3W9
RNA polymerase associated protein LEO1.
    
 0.984
A0A077ZFQ7
Leucine rich repeat serine:threonine protein.
   
 0.926
A0A077Z7X4
Integrator complex subunit 3.
    
 0.908
A0A077YZJ5
Tetratricopeptide repeat protein 8.
    
 0.883
A0A077ZHX3
Uncharacterized protein.
    
 0.882
A0A077ZM20
Uncharacterized protein.
    
 0.882
A0A077YXU6
Integrator complex subunit 10.
   
 0.864
A0A077ZHA0
Integrator complex subunit 11.
  
 0.845
A0A077ZAS1
PHTB1 C and PHTB1 N domain containing protein.
    
 0.836
A0A077ZD65
PHTB1 C domain containing protein.
    
 0.836
Your Current Organism:
Trichuris trichiura
NCBI taxonomy Id: 36087
Other names: T. trichiura, human whipworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.