STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A077Z4Z5Activator of basal transcription 1. (683 aa)    
Predicted Functional Partners:
A0A077ZMN9
IST1 protein.
    
 
 0.930
A0A077Z9Y5
EF-hand 4 domain containing protein.
    
 
 0.642
A0A077YXH3
E3 ubiquitin-protein ligase.
    
 
 0.506
A0A077Z1H2
E3 ubiquitin-protein ligase.
    
 
 0.506
A0A077Z102
Magnesium transporter NIPA2.
   
  
 0.500
A0A077Z1U5
Receptor expression-enhancing protein.
    
 
 0.496
A0A077Z841
Atlastin.
      
 0.473
A0A077ZKX1
Y phosphatase domain containing protein.
      
 0.461
A0A077ZJ93
Centromere protein J.
    
 
 0.452
A0A077Z6Q3
WW domain-containing protein.
    
 
 0.436
Your Current Organism:
Trichuris trichiura
NCBI taxonomy Id: 36087
Other names: T. trichiura, human whipworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.