STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A077Z627Splicing factor 3A subunit 1. (997 aa)    
Predicted Functional Partners:
A0A077ZAX1
Splicing factor 3A subunit 3.
   
 0.999
A0A077Z0V8
Zf-met domain containing protein.
   
 0.998
A0A077Z3X2
ATP dependent RNA helicase DDX46.
   
 0.997
A0A077Z8U5
RRM 1 domain containing protein.
   
 0.997
A0A077ZHS3
LRR 9 domain containing protein.
   
 0.997
A0A077Z2I3
Splicing factor 3B subunit 3.
   
 0.996
A0A077ZCR9
Splicing factor 3B subunit 2.
   
 0.996
A0A077YZJ6
Small nuclear ribonucleoprotein associated.
   
 0.994
A0A077Z5M4
U5 small nuclear ribonucleoprotein 200 kDa.
   
 
 0.994
A0A077ZKH7
SF3b1 domain containing protein.
   
 0.994
Your Current Organism:
Trichuris trichiura
NCBI taxonomy Id: 36087
Other names: T. trichiura, human whipworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.