Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A077ZA6560S ribosomal protein L10. (215 aa)    
Predicted Functional Partners:
A0A077YWM4
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.999
A0A077YX23
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.999
A0A077YXA5
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.999
A0A077YY12
60S ribosomal protein L30.
 
 
 0.999
A0A077Z099
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
A0A077Z0G1
Ribosomal L13 and P16-Arc domain containing prote in.
 
 0.999
A0A077Z0U4
Ubiquitin ribosomal protein putative ubiquitin f amily protein.
  
 0.999
A0A077Z4E8
Ribosomal protein L24.
  
 0.999
A0A077ZD98
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
A0A077ZG59
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.999
Your Current Organism:
Trichuris trichiura
NCBI taxonomy Id: 36087
Other names: T. trichiura, human whipworm
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