STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A077ZGG6Nup54 and DDE 1 domain containing protein. (516 aa)    
Predicted Functional Partners:
A0A077YZ56
Nsp1 C domain containing protein.
   
 0.999
A0A077Z7G3
Ran BP1 domain containing protein.
   
 0.999
A0A077Z9P6
DUF3414 domain containing protein.
   
 0.998
A0A077ZBC8
Nuclear pore protein.
   
 0.998
A0A077Z3P3
Nucleoporin N and Nucleoporin C domain containing protein.
   
 0.997
A0A077Z606
Nuclear pore complex protein Nup133.
   
 0.994
A0A077YW33
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.993
A0A077Z1D4
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
   
 0.991
A0A077Z7K6
WD40 domain containing protein; Belongs to the WD repeat SEC13 family.
    
 0.991
A0A077Z8T0
RanBP2-type domain-containing protein.
   
 0.989
Your Current Organism:
Trichuris trichiura
NCBI taxonomy Id: 36087
Other names: T. trichiura, human whipworm
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.