STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0067Putative cytochrome C. (224 aa)    
Predicted Functional Partners:
BAV1582
Putative dioxygenase system, reductase component.
   
 
 0.932
petC
Cytochrome C.
 
  
 0.849
BAV3192
Putative cytochrome C; Truncated at N-terminus relative its orthologue in B. bronchiseptica.
 
   
 0.839
petB
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.835
petA
Ubiquinol-cytochrome C reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.813
BAV1806
Cytochrome c family protein.
  
 0.764
BAV0069
Putative cytochrome c biogenesis protein.
     
 0.683
BAV0068
Putative C-type cytochrome bigenesis protein.
     
 0.667
BAV1534
Putative bifunctional protein,oxidoreductase/cytochrome subunits.
 
  
 0.665
hemB
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
     
 0.613
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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