STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0068Putative C-type cytochrome bigenesis protein. (693 aa)    
Predicted Functional Partners:
BAV0069
Putative cytochrome c biogenesis protein.
 
  
 0.995
BAV1056
Putative membrane protein.
  
     0.774
BAV3165
Putative thiol-disulfide oxidoreductase.
 
  
 0.706
BAV0067
Putative cytochrome C.
     
 0.681
BAV3100
Probable FAD-linked oxidase.
  
     0.666
cysG
Siroheme synthase includes: uroporphyrin-iii c-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
  
    0.624
BAV2110
Conserved hypothetical protein.
  
     0.530
hemB
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
    0.519
engB
Probable GTP-binding protein; Start codon not provided.
  
    0.519
BAV3074
Conserved hypothetical protein.
  
     0.504
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.