STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wlbGProbable sugar transferase; Start codon not provided. (199 aa)    
Predicted Functional Partners:
wlbF
Lipopolysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.887
xanB
Capsular polysaccharide biosynthesis protein [includes: mannose-6-phosphate isomerase and mannose-1-phosphate guanylyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.849
BAV2650
Putative capsular polysaccharide biosynthesis protein.
 
  
 0.820
wlbL
Putative sugar epimerase/dehydratase.
 
  
 0.802
wlbJK
Putative membrane protein.
     
 0.761
wlbE
Probable glycosyl transferase.
 
  
 0.752
wlbH
Putative glycosyl transferase.
 
  
 0.730
BAV2639
Putative capsular polysaccharide export protein; Start codon not provided.
 
  
 0.719
BAV2638
Putative capsular polysaccharide biosynthesis glucosyltransferase; Belongs to the glycosyltransferase 26 family.
   
 0.703
wlbC
Lipopolysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.699
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.