STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0150Conserved hypothetical protein; Start codon not provided. (206 aa)    
Predicted Functional Partners:
BAV0151
Putative high-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
   
 0.989
BAV0148
Putative cation ABC transporter, membrane protein.
 
     0.852
BAV0149
Putative cation ABC transporter,substrate-binding protein; Start codon not provided; Belongs to the bacterial solute-binding protein 9 family.
 
     0.845
BAV0147
Putative cation ABC transporter, ATP-binding protein.
 
   
 0.842
fur-2
Putative cation uptake regulatory protein; Belongs to the Fur family.
       0.565
BAV0152
TonB-dependent receptor protein.
       0.532
BAV0076
Putative transcriptional regulator.
  
     0.520
BAV2171
Conserved hypothetical protein; Start codon not provided.
  
     0.510
BAV2865
Putative cation transport-associated protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
  
     0.482
dltD
Putative D-alanine transferase.
  
     0.457
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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