STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nhaANa+/H+ antiporter protein; Start codon not provided. (390 aa)    
Predicted Functional Partners:
BAV1012
Putative exported protein.
  
    0.655
BAV2364
Type IV pilus assembly protein.
   
    0.652
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
   
  
 0.509
BAV0179
Conserved hypothetical protein.
       0.481
BAV0177
Putative nucleotide-binding protein.
       0.475
BAV0178
Putative histone acetyltransferase.
       0.470
mntH
Manganese transport protein.
     
 0.420
BAV3155
Probable sigma(54) modulation protein.
     
 0.419
gltB
Glutamate synthase [NADPH] large chain precursor.
     
 0.414
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.