STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0188Cyclic nucleotide-binding regulatory protein. (232 aa)    
Predicted Functional Partners:
BAV1276
Crp-family transcriptional regulator.
  
  
  0.918
wlbJK
Putative membrane protein.
  
 
 0.842
BAV0187
Putative AMP-binding enzyme; Start codon not provided.
 
  
 0.699
bvgS
Virulence sensor protein; Start codon not provided.
  
 
 0.626
BAV0186
Putative high-affinity branched-chain amino acid transporter, ATP-binding protein.
       0.593
rpoB
DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.586
BAV0185
Putative branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
     0.562
rpoC
DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.561
BAV2563
Putative exported protein; Start codon not provided.
 
 
 0.558
BAV0184
Putative branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.556
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.