STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0191Putative transferrin/hemoglobin-binding protein. (741 aa)    
Predicted Functional Partners:
BAV1572
Phage integrase (pseudogene); Unassigned protein domain.
 
 
 0.820
BAV2850
Putative iron transport sensor protein.
 
  
 0.753
tonB
Siderophore-mediated iron transport protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.751
BAV0900
Putative adhesin; Start codon not provided.
  
 
 
 0.740
BAV2114
Hypothetical protein; Start codon not provided; No significant database matches.
  
     0.721
fhaB
Filamentous hemagglutinin/adhesin.
  
   
 0.708
BAV3003
Putative membrane protein; Start codon not provided.
  
 
 0.692
BAV2972
Hypothetical protein; No significant database matches.
  
     0.685
BAV0856
Adhesin.
  
     0.682
sphB1
Autotransporter serine protease (pseudogene); Unassigned protein domain.
  
 
 
 0.657
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.