STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0195Amino acid-binding periplasmic protein; Belongs to the bacterial solute-binding protein 3 family. (338 aa)    
Predicted Functional Partners:
aapM
L-amino acid ABC transporter, permease protein.
 
 0.965
aapQ
L-amino acid ABC transporter, permease protein.
 
 
 0.958
aapP
L-amino acid ABC transporter, ATP-binding protein.
 
 0.957
BAV0898
Putative amino acid ABC transporter, permease component (pseudogene); Unassigned protein domain.
 
 0.945
aapJ
L-amino acid ABC transporter, substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
  
  
 
0.901
wlbJK
Putative membrane protein.
   
 
 0.542
BAV0194
Probable aminotransferase.
  
    0.500
gltB
Glutamate synthase [NADPH] large chain precursor.
     
 0.426
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.