STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0254Putative transcriptional regulator; Start codon not provided. (136 aa)    
Predicted Functional Partners:
BAV0691
Putative membrane protein.
  
     0.746
BAV0540
Putative membrane protein; No significant database matches. Seems to be unique to the Bordetellae.
  
     0.725
BAV2290
Putative pilus assembly protein; No significant database matches.
  
     0.709
BAV0255
Putative transcriptional regulator.
 
     0.689
BAV0476
Putative exported protein.
  
     0.665
BAV2363
Type IV pilus assembly protein.
  
     0.641
BAV0861
Putative ribonuclease inhibitor.
  
     0.632
BAV2871
Conserved hypothetical protein.
  
     0.629
BAV0851
Putative membrane protein.
  
     0.601
BAV3212
Hypothetical protein; No significant database matches. Seems to be unique to the bordetellae.
  
   
 0.582
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.