STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adcAcetoacetate decarboxylase; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family. (246 aa)    
Predicted Functional Partners:
bdhA
Putative D-beta-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
  0.986
lpsI
succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A.
    
 0.916
hbdH
D-beta-hydroxybutyrate dehydrogenase.
  
  
  0.915
hmgcL
hydroxymethylglutaryl-CoA lyase.
  
  
  0.911
lpsJ
succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B.
    
 0.911
BAV3023
D-beta-hydroxybutyrate dehydrogenase (short chain dehydrogenase/reductase); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
  0.900
BAV0262
Putative bifunctional protein: include phospholipase and oxidoreductase.
 
     0.590
BAV0261
Hypothetical protein; Start codon not provided; No significant database matches.
       0.513
phbB-2
acetoacetyl-CoA reductase; Start codon not provided; Similar to N-terminal half of Escherichia coli probable 3-hydroxybutyryl-coa dehydrogenase paaH SWALL:PAAH_ECOLI (SWALL:P76083) (475 aa) fasta scores: E(): 5.4e-15, 30.79 38d in 328 aa.
     
 0.415
BAV0807
Transmembrane regulator.
  
     0.412
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.