STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0276Putative extracellular solute-binding protein. (310 aa)    
Predicted Functional Partners:
BAV0274
Putative exported protein.
 
     0.829
BAV0273
Conserved hypothetical protein.
 
 
   0.810
BAV0269
Conserved hypothetical protein.
 
     0.804
BAV0271
Putative ATPase with chaperone activity; Start codon not provided; Belongs to the ClpA/ClpB family.
  
   0.787
BAV0272
Conserved hypothetical protein.
       0.787
BAV0268
Conserved hypothetical protein.
 
     0.786
BAV0270
Conserved hypothetical protein.
       0.778
BAV0275
Putative membrane protein; No significant database matches.
       0.773
BAV0267
Conserved hypothetical protein.
       0.724
BAV0277
Putative transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
   
 0.696
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.